Insertion junction: CLIP2.055196_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055196
Chromosome:chromosome 6
Location:3025612
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g274550 (1 of 6) IPR000719//IPR001245//IPR002290//IPR011009//IPR020635//IPR029016 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // GAF domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGGGAGGCAAGCTGGGAGAGGGAGGGAGGGAGGGAGGGACGGAGGCTG
Internal bar code:GGGAGGTAAGGCGCTATTGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1478
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGATAGGCGGAGTTGAGG
Suggested primer 2:GACAAGGGTGAGTGAGAGCC