Insertion junction: CLIP2.055198_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.055198
Chromosome:chromosome 10
Location:3397086
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443900 BOR1 (1 of 1) PF00955 - HCO3- transporter family (HCO3_cotransp); Borate transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGACAGGGCTCTCAATCGAGGGCTGCCGTGACCTGGCGTTTCCCCGGCA
Internal bar code:ATAGAGGACGAGTATCAAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:378
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCATTGACTACGCCATTG
Suggested primer 2:GTGCCTGGGACCTACATAGC