Insertion junction: CLIP2.055201_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055201
Chromosome:chromosome 7
Location:4439273
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343300 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCATGTTCCCCGGCAGGAACATGAGCGTGTGGGAGAATGCGCTTGCTG
Internal bar code:CTCACTGTCAAGCGCTCTCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2996
LEAP-Seq percent confirming:63.8889
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATACGAGTAGCGAGCCT
Suggested primer 2:ACTTCATGCCTTCCCGTCAG