Insertion junction: CLIP2.055212_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.055212
Chromosome:chromosome 1
Location:5010016
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034750 intron
Cre01.g034800 (1 of 1) PTHR21477//PTHR21477:SF12 - FAMILY NOT NAMED // CF9 PROTEIN-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTCAAGACCCGGTGCAGAGGGCGGGGCAGGGGCCGCCACCTTACCTGG
Internal bar code:CTCAGAGCCCTACAAATCAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:613
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAAGGAGCTGAGGGCAAT
Suggested primer 2:GCAGTGGCGGCAAACAATAA