Insertion junction: CLIP2.055213_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.055213
Chromosome:chromosome 13
Location:839632
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567300 (1 of 1) PTHR18968//PTHR18968:SF86 - THIAMINE PYROPHOSPHATE ENZYMES // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACACTCACACACACACACACACAACACACGCGAATAGCGCGTCGCAT
Internal bar code:TCTCCTGCACTGGGGGGGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:221
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGATGGCTGTGATGACAA
Suggested primer 2:CTAGCGCCACCCAGTCTATG