Insertion junction: CLIP2.055216_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.055216
Chromosome:chromosome 4
Location:2765115
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223650 FAP30 (1 of 1) PF02494 - HYR domain (HYR); Flagellar Associated Protein 30 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACGATGTCAGTGGCGGTGACGGCCGACCAGGTGACGGCAGCAGTGCCG
Internal bar code:TTCAGGTAACGCATCGAAAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:857
LEAP-Seq percent confirming:34.7826
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GATCGCCGCAATCAGTTGAC
Suggested primer 2:CTGACGTCTGGAGCTGTGTT