Insertion junction: CLIP2.055227_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055227
Chromosome:chromosome 13
Location:5109513
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g606900 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCGCGTAGGAGCAGTCCCAAGTCGTCATCCGTGAATTCTGCCGCCAG
Internal bar code:AATGAAAGATAATCATTCGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:365
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGAATCGCAGTTGCTAC
Suggested primer 2:CGCATGCCACTACGTTCATG