Insertion junction: CLIP2.055235_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055235
Chromosome:chromosome 12
Location:5777918
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532700 (1 of 1) IPR000104//IPR007308 - Antifreeze protein, type I // Protein of unknown function DUF408 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCCTGCGCGTACGTGTGTGCGCGGGTGTGCGGGCAGGTGTTAGAGCG
Internal bar code:GTTCGTGGGCGTAGATTTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1271
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAACTGCAGCAAATGACG
Suggested primer 2:AAAGTTGCGTGCACATGTCC