Insertion junction: CLIP2.055235_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.055235
Chromosome:plastome
Location:130529
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802318 ChreCp054,2716983,atpF ATP synthase CF0 B subunit; (1 of 1) PTHR34264:SF3 - ATP SYNTHASE SUBUNIT B, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGATAAGTTTTTACCAACAAAAGAAACAACAATACCAACAACAGCAG
Internal bar code:GGATAACTGAGTTAAGTCTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:163
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGCAGTGGCGGTACTACT
Suggested primer 2:TACTAGGACGTCCCCTTCGG