Insertion junction: CLIP2.055237_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055237
Chromosome:chromosome 1
Location:6114671
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043400 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCGGCGCTGCGTTCCGAGATTGCCGCGCTGCAGCAAGCCAGCGCCG
Internal bar code:CCCGACCTGTACGACGTGACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3828
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCTGCTCTCAGAATGCT
Suggested primer 2:TTGCCGACTGACAGAGCAAT