Insertion junction: CLIP2.055239_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055239
Chromosome:chromosome 7
Location:4325569
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g341250 (1 of 100) IPR001810 - F-box domain CDS
Cre07.g341251 (1 of 66) 2.7.12.1 - Dual-specificity kinase 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGGCTGCGCATCCTGCAACGAGTGGCGCCGCGGCTGCGATACGCTGCC
Internal bar code:AATGACACAGAGTTTCGAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1939
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCGTTGATGGTTGTGCAG
Suggested primer 2:GAAGACACCACGAGTCAGCA