Insertion junction: CLIP2.055240_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055240
Chromosome:chromosome 9
Location:4463456
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400738 (1 of 1) PTHR23012//PTHR23012:SF96 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGAGCTGGCCGGATACCAGGGCCACCAAGTCTGCGCACAGCACCCCG
Internal bar code:TTTTGAGAGGGTTGGTCCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2897
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCTGGATGCAGTGGCTT
Suggested primer 2:CCCCGCTAAACCCCTGTAAG