Insertion junction: CLIP2.055253_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055253
Chromosome:chromosome 5
Location:2698419
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre36.g759697 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAAAGCACACGCAGGCACGTACCCGTGTCGGTGAAGCTGACACCCTCC
Internal bar code:ATCAATGAGGTGGGCAGTGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1499
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCGCAACTACACCTACA
Suggested primer 2:ACTGGGTCAGCTGAATGGTG