Insertion junction: CLIP2.055253_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.055253
Chromosome:chromosome 12
Location:6103122
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g535050 (1 of 8) PF00211//PF01547 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // Bacterial extracellular solute-binding protein (SBP_bac_1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGTTTCAAAACCTGTTGACGGCATTGACCGCGGCTGCTGCTGGTTAAC
Internal bar code:CAACTAGAACAGTGATCCACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1532
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTTTGGCTGGGCAGATCT
Suggested primer 2:GCACCTGAAACTGGTAGCCT