Insertion junction: CLIP2.055254_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055254
Chromosome:plastome
Location:184870
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802330 orf2971,ftsH,ChreCp065,2716962 ATP-dependent zinc metalloprotease; (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAAGAGGAAAGTGGGTCCATTTCCTCTGCTGGAATGCCTCTCGGGCAAA
Internal bar code:CGGTAACGCAACTTCTGCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1475
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGTAACCAACGACGACGCTT
Suggested primer 2:GTCGACCAGGACGTTTGGAT