Insertion junction: CLIP2.055255_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055255
Chromosome:chromosome 7
Location:4586512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00101329

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCGAATCGACAACCCAAGGACCCCTCCACGTCCCCCACCCCGCTCCAC
Internal bar code:AACATCCAATGCATCTCTACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3297
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGTCCTCTGGGATTGGG
Suggested primer 2:GAAATTTTCCGCCGAGAGCC