Insertion junction: CLIP2.055256_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.055256
Chromosome:chromosome 6
Location:2355945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g267900 (1 of 1) PTHR12859:SF0 - PROTEIN PRAF-3, ISOFORM A intron
Cre06.g800641 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAGAGTGATTCGCGCGTTTGTGTACATACGATGCGTTACGCGTGGCTT
Internal bar code:AATCTGCCATACTCCATGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2219
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTACTCGCCCAGTTCCAA
Suggested primer 2:CGAGGACGAGGAGGAAATCG