Insertion junction: CLIP2.055257_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055257
Chromosome:chromosome 14
Location:1301615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g801612 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTCTGTCATGGCTACGCAGCCGGGGGCATGGTGTGCTCGCTAACCTT
Internal bar code:TCTCCTGCCGAGTCCCAAAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3510
LEAP-Seq percent confirming:5.71429
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTGGGCTGGCATCAAAC
Suggested primer 2:TTTGGGCGTGTCATAGACCC