Insertion junction: CLIP2.055258_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055258
Chromosome:chromosome 5
Location:1116829
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248200 (1 of 2) PTHR21493//PTHR21493:SF124 - CGI-141-RELATED/LIPASE CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGCAGCTACCCCCCGAACCGCGCCCATGCTAATAGACATGTCAGATAG
Internal bar code:GGCAGAACGGGTTAGTTGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:745
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCAAAAGAGACCTCCACA
Suggested primer 2:TGCCACCGCAACATTTCAAG