Insertion junction: CLIP2.055267_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.055267
Chromosome:chromosome 10
Location:6052726
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g461750 DMC5 Putative DNA methylase; (1 of 1) PF00145//PF12047 - C-5 cytosine-specific DNA methylase (DNA_methylase) // Cytosine specific DNA methyltransferase replication foci domain (DNMT1-RFD) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCAGCTATCTCGCAGCGAGCATGCTAATCAGTGTTTGCGAGTATCAC
Internal bar code:GCTGAAGTTGGAGTGATGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:197
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTGACAATGTCTCCGCT
Suggested primer 2:GGTAAAGAGTAGGCTGCGCA