Insertion junction: CLIP2.055272_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.055272
Chromosome:chromosome 7
Location:1062244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g320000 GT90-38,GT90F38 GT90 family protein 38; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCGTGGAGGACCTCAAGCCCTGGAGAGCGCGGGCACCGCTCAAGACGG
Internal bar code:CTGTTGGGTGTCAGAGCAATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1286
LEAP-Seq percent confirming:67.8571
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTCAGGATTGGTGAGCC
Suggested primer 2:AGCCGTGGACTTGTTATGGG