Insertion junction: CLIP2.055274_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.055274
Chromosome:chromosome 13
Location:35536
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g561800 GEX1 (1 of 34) PF00168 - C2 domain (C2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCAATGCGGGCGAGCTGCTCTCGGGCGTGAAGCTAACCTTTGCGCCAG
Internal bar code:GCTCGGTAGAAATAGTGTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1919
LEAP-Seq percent confirming:88.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGAGGCCACGTACGTAG
Suggested primer 2:AGCGTGTTATGTGCAGGACA