Insertion junction: CLIP2.055305_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.055305
Chromosome:chromosome 3
Location:3113060
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164500 (1 of 1) IPR026571 - Transmembrane protein 186 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAATCAATTCCGGGCTGTCATCCTAGGAATCCTCAGCCCTGGTCTGGA
Internal bar code:ACGTATGAAGCTTTTAGTTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:84
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTACGACGTGACCACACA
Suggested primer 2:AAGCCATGTGCCTCCTACAC