Insertion junction: CLIP2.055306_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055306
Chromosome:chromosome 17
Location:6770188
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g746647 PUF2 (1 of 1) PTHR12537:SF12 - MATERNAL PROTEIN PUMILIO; Puf protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAGCAAGTTGAACGTGGCCTGTGCCTGCGCCTCGTCCGCCTTGCCCTG
Internal bar code:TATCTGTGTTCTTAATTGCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2062
LEAP-Seq percent confirming:51.8519
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GACTCGCCGAGATGAGTGAG
Suggested primer 2:CGCACACACGACATGACAAG