Insertion junction: CLIP2.055309_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055309
Chromosome:chromosome 7
Location:3528901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGGCGCGACCGTGCGCCGTGCCTGGCCTACGGCCGGCACAACCTATTC
Internal bar code:GGGCGCACTTGACGGATTCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3768
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGTAGGGTGAGTGCTT
Suggested primer 2:GCGTTACGTGTTGGCAGTTT