Insertion junction: CLIP2.055313_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055313
Chromosome:chromosome 16
Location:1515296
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653150 CPR3 (1 of 2) PF01841 - Transglutaminase-like superfamily (Transglut_core); Cysteine protease, transglutaminase-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGATTCCTAAACGCTGACCGCATTACCCTTGCCCTGCAGCGAACTGTC
Internal bar code:CCTTCGGGATTCGGGTGCCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3839
LEAP-Seq percent confirming:97.3333
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGTCCACTAAGGCCTTG
Suggested primer 2:CATAATCTCGGGCGTCTGCT