Insertion junction: CLIP2.055323_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055323
Chromosome:plastome
Location:123302
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802313 rbcL,ChreCp049,2717040 (1 of 1) K01601 - ribulose-bisphosphate carboxylase large chain (rbcL); RuBisCO large subunit CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCTCGACTGATAAGACAAGTACATAAATTTGCTAGTTTACATTATTT
Internal bar code:TGGTTCAAGTCAGTGCTTCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:66
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAACGCATGAATGGTTGT
Suggested primer 2:TCGCTTATCCCCTGACAGGA