Insertion junction: CLIP2.055326_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055326
Chromosome:chromosome 3
Location:5035181
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g179921 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGCGGCAGCGGCTGCGGCAGCGGCTCAGCCCCTGGCGCCGCACGCAC
Internal bar code:TCGGGGGTGGCTCTGGCTGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:609
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACCCCTACCCGTACCAG
Suggested primer 2:GGCTGGGTACTCAGATGCTG