Insertion junction: CLIP2.055327_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.055327
Chromosome:chromosome 16
Location:605509
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692150 GT90-29,GT90F29 (1 of 11) 2.4.2.26 - Protein xylosyltransferase / Uridine diphosphoxylose-protein xylosyltransferase; GT90 family protein 29 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGTTTTGTCTGCAGCACACCTGTCTGTCCTTTTTGCACGGCTTGCGA
Internal bar code:AGTTTAACCTGATTTGGCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:343
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCGCGTTGACAGAAAAG
Suggested primer 2:ACGTGACCAATCGAGATCCG