Insertion junction: CLIP2.055327_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.055327
Chromosome:chromosome 16
Location:605515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692150 GT90-29,GT90F29 (1 of 11) 2.4.2.26 - Protein xylosyltransferase / Uridine diphosphoxylose-protein xylosyltransferase; GT90 family protein 29 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCAATCGGGTGACAATAGGAGGCCGCGGCGTGCTCCTGCGGCTGGCAG
Internal bar code:GATGTACAGGGACAAAACCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2659
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGACCAATCGAGATCCG
Suggested primer 2:TGTGCGCGTTGACAGAAAAG