Insertion junction: CLIP2.055334_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055334
Chromosome:chromosome 12
Location:9055748
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544650 (1 of 10) PF13489 - Methyltransferase domain (Methyltransf_23) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAGACAACAGCGCCTTCCTGCTAATTGCTATCGTACTCGCGCAGGGGC
Internal bar code:GTCTATATATGGCCGGGGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2606
LEAP-Seq percent confirming:35.8974
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ACACATCGGGTCCTCGAAAC
Suggested primer 2:TTGCGTTGTGGTTGGAACAC