Insertion junction: CLIP2.055354_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055354
Chromosome:chromosome 17
Location:2547969
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715950 (1 of 2) PTHR12775:SF0 - PROTEIN RTF2 HOMOLOG CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGCTCTTCGCGCGGCGGCAACGCGGCCGGCAAGGTCTCGGACCCAGG
Internal bar code:AGAGATGTACTGGACGTGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2037
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCCCTGGCGCACAATAT
Suggested primer 2:GCGGCCAGGACTAAAACTCT