Insertion junction: CLIP2.055357_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.055357
Chromosome:chromosome 10
Location:4902036
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453728 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGATGGCGGTGGACGGTGGCTCAGAAGACGCCAATGGCAGCGACTGGT
Internal bar code:GGGGTGAATTCTCATTCGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5107
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAAGGGAGGCGACTGTTC
Suggested primer 2:CCAGTAGCAAAATTCGGCGG