Insertion junction: CLIP2.055370_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.055370
Chromosome:chromosome 14
Location:428386
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g610647 (1 of 3) PF02209 - Villin headpiece domain (VHP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATTAGGTATAGCCAGCTCAAAACGGGACGCCACGGCGAGCTCTGGCGC
Internal bar code:GATATGCAGTAACTTGTAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:138
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TACCCAACAGACGCACAGAC
Suggested primer 2:CCGCAACTCGCATATCCTCT