Insertion junction: CLIP2.055370_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055370
Chromosome:chromosome 14
Location:428386
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g610647 (1 of 3) PF02209 - Villin headpiece domain (VHP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAAGTAGTGTGGGGGGGAGGAAGGCGTTCTTATTACGACTTGAACCGA
Internal bar code:GATATGCAGTAACTTGTAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:647
LEAP-Seq percent confirming:45.9459
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCAACTCGCATATCCTCT
Suggested primer 2:TACCCAACAGACGCACAGAC