Insertion junction: CLIP2.055375_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.055375
Chromosome:chromosome 16
Location:2153880
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801897 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTAACCCCCAACCCAGACGTCGTGTCACTTGCCACATCAGCCCGCGGCG
Internal bar code:TCGGGCATCAGTTAATACCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1952
LEAP-Seq percent confirming:98.1132
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCCCCAACTAAACACCTC
Suggested primer 2:GCTTTGTCGGTGGCGTTG