Insertion junction: CLIP2.055377_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055377
Chromosome:chromosome 1
Location:5546659
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800096 (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCTGAAGTTCCAGTTCCGCACCGCAGCGCAGCTGGCGTCGCAGGCGG
Internal bar code:GCTGTCAGCACGGTGTTTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2074
LEAP-Seq percent confirming:75.5319
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:CTCATCGCACCTCATACCCC
Suggested primer 2:AACTCCCCTGCAGATTCGTG