Insertion junction: CLIP2.055378_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055378
Chromosome:chromosome 6
Location:2595805
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g269865 SMM18 (1 of 1) IPR000104//IPR029044 - Antifreeze protein, type I // Nucleotide-diphospho-sugar transferases; S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCACTACGCTTCCTGCTCGCCCAGTAGGGTGTCGCCGGGCAGCGGTGT
Internal bar code:GGACTCTTGTACGTATAGCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1895
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGTGTGTGTGTGTGTGT
Suggested primer 2:CGAAAGTCTGCGACCTGTCT