Insertion junction: CLIP2.055382_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055382
Chromosome:chromosome 3
Location:1190311
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149400 RWP11 (1 of 1) IPR003035//IPR011989//IPR016181 - RWP-RK domain // Armadillo-like helical // Acyl-CoA N-acyltransferase; RWP-RK transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGGTGGCTTCCTGCAGGGCATGCGGGCTGCTGGCCGGCGCCTGCTGA
Internal bar code:ATCTACAAACCGCTTCCACGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2859
LEAP-Seq percent confirming:83.1169
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCACTAAGGCGAATTCG
Suggested primer 2:CTCGTCCTCCGAATCGCTAC