Insertion junction: CLIP2.055401_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.055401
Chromosome:chromosome 16
Location:7443904
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g681354 (1 of 41) PF13920 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATGCAGGTCTTCACCCCTGCTTCAACGCAATACGCACCCCTGCACCTA
Internal bar code:GTCCCAGCGTAGCGGCAGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:660
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCGAAAAGCTAGAGGAGG
Suggested primer 2:CTTAACGGATTGCTGACGCG