Insertion junction: CLIP2.055402_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055402
Chromosome:chromosome 6
Location:4858787
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280350 (1 of 5) IPR001680//IPR011047//IPR017986//IPR020472 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // WD40-repeat-containing domain // G-protein beta WD-40 repeat 3'UTR
Cre06.g280385 PAP6 predicted protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGACGGATGCGGTGCGTCTGAGGATGACGGGGACGAGGAGGCGGGTGG
Internal bar code:AACTACATTCCCCGAATCACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1233
LEAP-Seq percent confirming:75.6757
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TACGTGTCCAAGACCATGCC
Suggested primer 2:GCGACTCAGTGTAGGCTTCA