Insertion junction: CLIP2.055404_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055404
Chromosome:chromosome 2
Location:1825091
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g087000 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGTGGAAGCCGCGGACGCGGCCGCCGCCTCGACCGCCCTGCGGGCGG
Internal bar code:AGTTCCTCTTTAACGGAGAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3375
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGGACGAGGAGGAAGACGAA
Suggested primer 2:AGCACCACCCTCAGCATTAC