Insertion junction: CLIP2.055411_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055411
Chromosome:chromosome 16
Location:3606362
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672041 (1 of 1) 2.1.1.228 - tRNA (guanine(37)-N(1))-methyltransferase / tRNA-(N(1)G37) methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAGAAACGTGGATGGGCGTGGTAAAACTGATGATCCAAACATTGGACG
Internal bar code:GTGGCTGTATCTCTCGCACAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1956
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CGACTGTTCAGACACCGACA
Suggested primer 2:ACACTTACCTGGTGCGTCTG