Insertion junction: CLIP2.055411_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055411
Chromosome:chromosome 16
Location:3606363
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672041 (1 of 1) 2.1.1.228 - tRNA (guanine(37)-N(1))-methyltransferase / tRNA-(N(1)G37) methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAACCCCCTCTCTCGGCACGCGCACAGGTTTACGCTGGACCGGCCTC
Internal bar code:CGGAGAACATCGCCTCACGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3676
LEAP-Seq percent confirming:97.0149
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTTACCTGGTGCGTCTG
Suggested primer 2:CGACTGTTCAGACACCGACA