Insertion junction: CLIP2.055415_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055415
Chromosome:chromosome 16
Location:1157727
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650300 HTR39,HTR25 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTCACACCGCCGGTGGCCGGTGTCTTACGAGCGGCCTTGGTGGCCAG
Internal bar code:CCATGGGGAATGACCGCGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1955
LEAP-Seq percent confirming:58.9744
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTAAGTGACCGAGTCGC
Suggested primer 2:GCAATACGCCATGTCAGCTG