Insertion junction: CLIP2.055417_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055417
Chromosome:chromosome 7
Location:5145108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g348450 (1 of 18) K13412 - calcium-dependent protein kinase (CPK) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACGTCGCTGAAACGTTGCAAGTCACCACCTTCGCACGCCTCCGTAACG
Internal bar code:GATGGGGTAAACCAATTGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2324
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGAAAACGCTGCCGAAAG
Suggested primer 2:ACGCCAGCTACGTAATACCG