Insertion junction: CLIP2.055426_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055426
Chromosome:chromosome 4
Location:3814432
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g229700 UGP1,UGP (1 of 1) K00963 - UTP--glucose-1-phosphate uridylyltransferase (UGP2, galU, galF); UDP-glucose pyrophosphorylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTCGCCCCCACCCTCCCCCATTGTCGCGTGCCACTCCGTTGTCAAGCA
Internal bar code:TTATTTATTGGCTAATCATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:110
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGCGTTGTAGATACCAG
Suggested primer 2:TGATCCTGCCACTGCTTCTG