Insertion junction: CLIP2.055426_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.055426
Chromosome:chromosome 4
Location:3814436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g229700 UGP1,UGP (1 of 1) K00963 - UTP--glucose-1-phosphate uridylyltransferase (UGP2, galU, galF); UDP-glucose pyrophosphorylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGATTGGAAAGGAGGGGAGGGGGAATGGCGTGTGTGTACGATATGCCG
Internal bar code:GCAATTGATCCACCGCAGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:145
LEAP-Seq percent confirming:12.2807
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TGATCCTGCCACTGCTTCTG
Suggested primer 2:GGGGGCGTTGTAGATACCAG