Insertion junction: CLIP2.055428_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.055428
Chromosome:chromosome 17
Location:328169
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g698200 MMS21 SUMO ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTGGCAGATGGGACGTGGGGCGGAGCGACGGGGAAGTTGAGGTGGGT
Internal bar code:GGCACGCACACCAAGCGAGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:220
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATGCATGTGTGTGTGTG
Suggested primer 2:ATCACCTAGCCAACCCTTGC