Insertion junction: CLIP2.055433_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055433
Chromosome:chromosome 2
Location:5778814
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116900 SETB,HDP1 Homolog of small hydrophilic plant seed proteins; (1 of 1) PTHR34671:SF1 - EM-LIKE PROTEIN GEA6 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGCGCCACCGCCTCCAACTCCTCATGCGAGTGCGTCGCCGCCGCCAC
Internal bar code:ACCGATACACTGTTCAAGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:368
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGGCAGGTCTGGTCAGA
Suggested primer 2:CGGGTAAGTATGGTCTCGGC